Nonequilibrium thermodynamic potentials for continuous-time Markov chains

Nonequilibrium thermodynamic potentials for continuous-time Markov chains.

We connect the rare fluctuations of an equilibrium (EQ) process and the typical fluctuations of a nonequilibrium (NE) stationary process. In the framework of large deviation theory, this observation allows us to introduce NE thermodynamic potentials. For continuous-time Markov chains, we identify the relevant pairs of conjugated variables and propose two NE ensembles: one with fixed dynamics an...

Continuous Time Markov Chains

Discrete-time Markov chains are useful in simulation, since updating algorithms are easier to construct in discrete steps. They can also be useful as crude models of physical, biological, and social processes. However, in the physical and biological worlds time runs continuously, and so discrete-time mathematical models are not always appropriate. This is especially true in population biology –...

Continuous-time Markov Chains

Continuous-time homogeneous Markov chains

Verifying Continuous Time Markov Chains

We present a logical formalism for expressing properties of continuous time Markov chains. The semantics for such properties arise as a natural extension of previous work on discrete time Markov chains to continuous time. The major result is that the veriication problem is decidable; this is shown using results in algebraic and transcendental number theory.